chr3 : 541,148 541,641
493 bp 19 TFs 1 linked gene
This 493 bp open chromatin element is linked to LINC01266 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01266 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:536,148 – 546,641
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 137 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 295 bp overlap
ChIP BLaER1 ENCFF364PUR 197 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 315 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 345 bp overlap
ESR1 9 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 122 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 158 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 461 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 363 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 419 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 343 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 232 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 430 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 336 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 198 bp overlap
FOXM1 1 dataset
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 158 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 412 bp overlap
GATA6 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 273 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 185 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 123 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 152 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 329 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 429 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 386 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 216 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 295 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 295 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 231 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 140 bp overlap