chr2 : 153,488,086 153,488,640
554 bp 20 TFs 1 linked gene
This 554 bp open chromatin element is linked to RPRM and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RPRM 9.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:153,483,086 – 153,493,640
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 1 dataset
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 293 bp overlap
BRD4 1 dataset
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 185 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 554 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 155 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 295 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 273 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 190 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 551 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 431 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 554 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 273 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 54 bp overlap
PGR 7 datasets
ChIP AB32 GSE31129.PGR.AB32 251 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 259 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 254 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 339 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 329 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 230 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 319 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 232 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 361 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 202 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 88 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 277 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 120 bp overlap
SMARCA4 11 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 355 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 263 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 349 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 300 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 309 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 291 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 554 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 244 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 412 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 554 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 234 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 457 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 92 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 467 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 307 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 554 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 223 bp overlap
SPI1 5 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 313 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 318 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 340 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 264 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 188 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 342 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 280 bp overlap