chr1 : 32,707,623 32,707,920
297 bp 22 TFs 1 linked gene
This 297 bp open chromatin element is linked to SYNC and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SYNC 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:32,702,623 – 32,712,920
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 261 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 176 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 297 bp overlap
ChIP DE DE-FOXA2-2 297 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 148 bp overlap
GATA2 9 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 171 bp overlap
ChIP HepG2 ENCFF905PYM 267 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 172 bp overlap
ChIP K562 ENCFF088XQT 297 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 163 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 163 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 160 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 152 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 252 bp overlap
GATA3 4 datasets
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 223 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 215 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 169 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 224 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 297 bp overlap
ChIP DE DE-GATA4-2 297 bp overlap
ChIP foregut GSE117136.GATA4.foregut 297 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 297 bp overlap
ChIP DE DE-GATA6-2 297 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 297 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 297 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 135 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 297 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 297 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 293 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 297 bp overlap
ChIP foregut GSE117136.GATA6.foregut 297 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 247 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCFF683ZWN 100 bp overlap
NR5A1 2 datasets
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 60 bp overlap
ChIP HepG2 ENCFF970YZO 122 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 178 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 178 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 297 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 297 bp overlap
ZEB1 1 dataset
ChIP Hep-G2 ENCSR000BVN.ZEB1.Hep-G2 53 bp overlap
ZNF121 2 datasets
ChIP Hep-G2 ENCSR945QEW.ZNF121.Hep-G2 52 bp overlap
ChIP HepG2 ENCFF343YSL 84 bp overlap