Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

30 transcription factors

ATF2 1 dataset

ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 151 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD4 2 datasets

ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 103 bp overlap

ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 89 bp overlap

Bcl11B 1 dataset

Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap

Bhlha15 1 dataset

Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap

CREB1 6 datasets

ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 121 bp overlap

ChIP HepG2 ENCFF792THT 167 bp overlap

ChIP MCF-7 ENCFF341ZEM 184 bp overlap

ChIP MCF-7 ENCFF867SAS 187 bp overlap

ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 148 bp overlap

ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 186 bp overlap

CTCF 57 datasets

ChIP BC-3 GSE135740.CTCF.BC-3 150 bp overlap

ChIP C4-2B ENCFF821XVN 194 bp overlap

ChIP Caco-2 ENCFF753NZV 194 bp overlap

ChIP D54 ENCSR000DKN.CTCF.D54 125 bp overlap

ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 194 bp overlap

ChIP GM04604 GSE148179.CTCF.GM04604 182 bp overlap

ChIP GM04648 GSE148179.CTCF.GM04648 147 bp overlap

ChIP GM12866 ENCSR000DRF.CTCF.GM12866 107 bp overlap

ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 107 bp overlap

ChIP GM12873 ENCSR000DRP.CTCF.GM12873 96 bp overlap

ChIP GM23338 ENCFF531QOI 152 bp overlap

ChIP GM23338 ENCFF772DML 169 bp overlap

ChIP GM23338 ENCFF832KWE 194 bp overlap

ChIP GP5D GSE51234.CTCF.GP5D 194 bp overlap

ChIP H1 ENCFF764RHO 184 bp overlap

ChIP H9 ENCFF152GTF 129 bp overlap

ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 163 bp overlap

ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 117 bp overlap

ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 148 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 183 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 157 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 194 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 179 bp overlap

ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 194 bp overlap

ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 185 bp overlap

ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 193 bp overlap

ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 126 bp overlap

ChIP K-562_15923 GSE131349.CTCF.K-562_15923 114 bp overlap

ChIP K-562_5635 GSE131349.CTCF.K-562_5635 81 bp overlap

ChIP K-562_8004 GSE131349.CTCF.K-562_8004 93 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 140 bp overlap

ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 149 bp overlap

ChIP MCF-7 ENCFF139NQI 194 bp overlap

ChIP MCF-7 GSE137216.CTCF.MCF-7 194 bp overlap

ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 191 bp overlap

ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 143 bp overlap

ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 140 bp overlap

ChIP MCF-7 GSE70764.CTCF.MCF-7 118 bp overlap

ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 194 bp overlap

ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 152 bp overlap

ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 194 bp overlap

ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 160 bp overlap

ChIP PC-3 ENCSR359LOD.CTCF.PC-3 194 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap

ChIP delta-47 GSE70764.CTCF.delta-47 194 bp overlap

ChIP endodermal cell ENCFF471YCZ 128 bp overlap

ChIP epithelial cell of prostate ENCFF086GTI 194 bp overlap

ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 194 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 145 bp overlap

ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 97 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 155 bp overlap

ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 194 bp overlap

ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 168 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 161 bp overlap

ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 181 bp overlap

ChIP type B pancreatic cell ENCFF910FNQ 194 bp overlap

ChIP type B pancreatic cell ENCFF910FNQ 73 bp overlap

FOXA1 3 datasets

ChIP MCF-7 ERP000380.FOXA1.MCF-7 108 bp overlap

ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 131 bp overlap

ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 76 bp overlap

Gfi1B 1 dataset

Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

HNF4A 1 dataset

ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap

MYBL1 1 dataset

Motif DE_12h DE_12h-MYBL1_MA0776.1 12 bp overlap

MYF5 1 dataset

Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap

NEUROD1 1 dataset

Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap

NRIP1 1 dataset

ChIP MCF-7 ERP005838.NRIP1.MCF-7 125 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

POU2F3 1 dataset

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

POU5F1 1 dataset

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap

RUNX2 1 dataset

Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap

Runx1 1 dataset

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

SPI1 7 datasets

ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 55 bp overlap

ChIP HL-60 ENCFF645GBT 106 bp overlap

ChIP K-562 GSE70482.SPI1.K-562 66 bp overlap

ChIP K562 ENCFF410ORC 57 bp overlap

ChIP NB4 GSE128834.SPI1.NB4 96 bp overlap

ChIP U-937 GSE128834.SPI1.U-937 95 bp overlap

ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 55 bp overlap

SPIB 1 dataset

ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 123 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 194 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 194 bp overlap

ZBTB18 1 dataset

Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap

ZSCAN16 1 dataset

Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Genome Browser