chr2 : 30,152,494 30,152,682
188 bp 17 TFs 2 linked genes
This 188 bp open chromatin element is linked to YPEL5 and ENSG00000233862 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
YPEL5 5.6 kb Proximal Proximity
ENSG00000233862 5.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:30,147,494 – 30,157,682
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 188 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 188 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCFF829RWA 188 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 188 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 166 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 188 bp overlap
ChIP DE DE-FOXA2-2 188 bp overlap
GATA2 5 datasets
ChIP SH-SY5Y ENCFF485YIB 188 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 188 bp overlap
ChIP SK-N-SH ENCFF764OZD 188 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 188 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 188 bp overlap
GATA3 6 datasets
ChIP Kelly GSE65664.GATA3.Kelly 152 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 148 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 186 bp overlap
ChIP SH-SY5Y ENCFF475HYF 188 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 188 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 142 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 188 bp overlap
ChIP DE DE-GATA4-2 188 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 188 bp overlap
ChIP foregut GSE117136.GATA4.foregut 188 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 181 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 188 bp overlap
ChIP DE DE-GATA6-2 188 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 188 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 188 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 188 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 188 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 188 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 188 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 188 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 187 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 188 bp overlap
ChIP HEK293 ENCFF283AJL 182 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 175 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 188 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 188 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 188 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 160 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 188 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 188 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 188 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 137 bp overlap