chrX : 140,501,926 140,502,196
270 bp 24 TFs 1 linked gene
This 270 bp open chromatin element is linked to SOX3 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SOX3 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:140,496,926 – 140,507,196
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 231 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 270 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 80 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 225 bp overlap
CBX7 3 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 270 bp overlap
ChIP hESC GSE133412.CBX7.hESC 270 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 270 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 192 bp overlap
EZH2 17 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 269 bp overlap
ChIP A673 ENCFF955JRZ 270 bp overlap
ChIP GM23248 ENCFF404ZHM 270 bp overlap
ChIP GM23248 ENCFF404ZHM 117 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 270 bp overlap
ChIP PC-3 ENCFF855OUB 99 bp overlap
ChIP PC-3 ENCFF928VSN 174 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 136 bp overlap
ChIP SK-N-SH ENCFF657FZK 270 bp overlap
ChIP SK-N-SH ENCFF657FZK 99 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 150 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 225 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 270 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 270 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 270 bp overlap
ChIP keratinocyte ENCFF070STK 270 bp overlap
ChIP keratinocyte ENCFF070STK 130 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 270 bp overlap
ChIP DE DE-FOXA2-2 270 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 215 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 241 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 270 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 85 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 157 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 93 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 270 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 270 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 221 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 59 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 270 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 270 bp overlap
RNF2 1 dataset
ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 166 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 72 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 182 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 270 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 203 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 87 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 270 bp overlap
SUZ12 13 datasets
ChIP GM12878 ENCFF498QAM 270 bp overlap
ChIP GM12878 ENCFF498QAM 77 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 268 bp overlap
ChIP H1 ENCFF881NFR 270 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 124 bp overlap
ChIP HEK293T_PCGF1352fl_OHT GSE119618.SUZ12.HEK293T_PCGF1352fl_OHT 205 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 270 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 270 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 270 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 248 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 178 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 153 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 255 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 270 bp overlap