chr22 : 29,431,916 29,432,715
799 bp 14 TFs 11 linked genes
This 799 bp open chromatin element is linked to 11 target genes and is bound by 14 transcription factors.
Linked Genes
11 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
RFPL1 5.9 kb Proximal Proximity
AP1B1 43.8 kb Distal Multiome
RFPL1S 45.9 kb Distal Multiome
NEFH 47.9 kb Distal Multiome
THOC5 121.4 kb Distal Multiome
GAS2L1 125.3 kb Distal Multiome
NIPSNAP1 148.8 kb Distal Multiome
EWSR1 164.0 kb Distal Multiome
RHBDD3 164.1 kb Distal Multiome
NF2 171.3 kb Distal Multiome
EMID1 226.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:29,426,916 – 29,437,715
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 100 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 87 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 257 bp overlap
ChIP BLaER1 ENCFF262VBH 124 bp overlap
ChIP BLaER1 ENCFF335XTP 251 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 261 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 674 bp overlap
ChIP DE DE-FOXA2-2 569 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 602 bp overlap
ChIP DE DE-GATA4-2 617 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 359 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 475 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 569 bp overlap
ChIP DE DE-GATA6-2 737 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 465 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 441 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 567 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 646 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 619 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 323 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 311 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 369 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 153 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 269 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 294 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 270 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 477 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 480 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 247 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 614 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 189 bp overlap