Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

39 transcription factors

Atf3 1 dataset

Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap

BACH1 1 dataset

Motif DE_60h DE_60h-BACH1_MA1633.2 9 bp overlap

BATF 1 dataset

Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap

BNC2 1 dataset

Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap

CBFA2T3 2 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 264 bp overlap

ChIP K562 ENCFF673OEZ 376 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 258 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 179 bp overlap

EP300 1 dataset

ChIP neural ENCSR843ZUP.EP300.neural 201 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 355 bp overlap

ChIP DE DE-FOXA2-2 286 bp overlap

FOXH1 1 dataset

Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap

GATA1 3 datasets

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 76 bp overlap

ChIP K-562 GSE107726.GATA1.K-562 183 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 152 bp overlap

GATA1::TAL1 1 dataset

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 422 bp overlap

ChIP DE DE-GATA4-2 438 bp overlap

ChIP foregut GSE117136.GATA4.foregut 343 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 404 bp overlap

ChIP DE DE-GATA6-2 433 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 303 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 284 bp overlap

ChIP foregut GSE117136.GATA6.foregut 274 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

JUN::JUNB 1 dataset

Motif DE_60h DE_60h-JUNJUNB_MA1132.2 8 bp overlap

Jun 1 dataset

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

NR1D2 1 dataset

Motif DE_60h DE_60h-NR1D2_MA1532.2 15 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

PKNOX1 1 dataset

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 289 bp overlap

POU3F1 1 dataset

Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap

POU3F4 1 dataset

Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

RREB1 1 dataset

Motif DE_60h DE_60h-RREB1_MA0073.2 19 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 148 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 349 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 350 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 185 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 322 bp overlap

TAL1 1 dataset

ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 154 bp overlap

TRIM24 1 dataset

ChIP K-562 ENCSR907MZR.TRIM24.K-562 204 bp overlap

ZNF354C 1 dataset

Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap

Genome Browser