chr2 : 16,961,998 16,962,272
274 bp 19 TFs 1 linked gene
This 274 bp open chromatin element is linked to LINC01866 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01866 7.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:16,956,998 – 16,967,272
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 266 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 274 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 274 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 188 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 211 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 53 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 274 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 274 bp overlap
ChIP DE DE-GATA4-2 263 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 201 bp overlap
ChIP DE DE-GATA6-2 261 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 274 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 200 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 274 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 131 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 228 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 161 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 174 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 274 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 249 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 219 bp overlap
SMARCA4 3 datasets
ChIP NGP GSE134626.SMARCA4.NGP 274 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 144 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 72 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 231 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 83 bp overlap
ZNF565 1 dataset
ChIP HEK293T GSE78099.ZNF565.HEK293T 128 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 57 bp overlap