chr20 : 38,608,195 38,608,477
282 bp 25 TFs 1 linked gene
This 282 bp open chromatin element is linked to ARHGAP40 and is bound by 25 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ARHGAP40 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:38,603,195 – 38,613,477
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 118 bp overlap
CDK2 1 dataset
ChIP T-47D_PROGESTIN_5M GSE53855.CDK2.T-47D_PROGESTIN_5M 109 bp overlap
CTCF 1 dataset
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 53 bp overlap
EZH2 1 dataset
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 282 bp overlap
FOXA1 2 datasets
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 183 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 147 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 177 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 201 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 260 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 177 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 219 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 197 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 282 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 282 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 161 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 115 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 282 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 282 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 152 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 198 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 264 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 282 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 260 bp overlap
RELA 1 dataset
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 221 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 251 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 282 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 282 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 230 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 272 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 282 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 216 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 269 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 161 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 148 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 282 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 282 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 155 bp overlap
ZFX 1 dataset
ChIP MCF-7 ENCFF009NAJ 177 bp overlap