chr20 : 1,004,172 1,004,579
407 bp 22 TFs 1 linked gene
This 407 bp open chromatin element is linked to RSPO4 and is bound by 22 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RSPO4 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:999,172 – 1,009,579
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 133 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 394 bp overlap
GATA2 6 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 193 bp overlap
ChIP SH-SY5Y ENCFF485YIB 299 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 250 bp overlap
ChIP SK-N-SH ENCFF764OZD 299 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 197 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 56 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 407 bp overlap
ChIP DE DE-GATA4-2 407 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 356 bp overlap
ChIP DE DE-GATA6-2 407 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 353 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 341 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 367 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 407 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 407 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 407 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 108 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 260 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 110 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 92 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 279 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 234 bp overlap
KDM1A 2 datasets
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 86 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 243 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 239 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 125 bp overlap
ChIP K562 ENCFF248CGR 134 bp overlap
ChIP K562 ENCFF957ORK 134 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 407 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 387 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 407 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 407 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 165 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 76 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 80 bp overlap
ChIP K562 ENCFF361LXT 131 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 341 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 137 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 90 bp overlap
ChIP HepG2 ENCFF490FFQ 124 bp overlap