chr18 : 64,259,988 64,260,209
221 bp 19 TFs 1 linked gene
This 221 bp open chromatin element is linked to LINC01538 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01538 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:64,254,988 – 64,265,209
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 115 bp overlap
CTCF 2 datasets
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 96 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 197 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 221 bp overlap
FOXA1 1 dataset
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 221 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 221 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 217 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 221 bp overlap
ChIP DE DE-GATA4-2 221 bp overlap
ChIP foregut GSE117136.GATA4.foregut 221 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 221 bp overlap
ChIP DE DE-GATA6-2 221 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 132 bp overlap
JUN 1 dataset
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 74 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 115 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 165 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SPI1 2 datasets
ChIP HL-60 ENCFF645GBT 128 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 109 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 111 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 221 bp overlap
TFAP2C 1 dataset
ChIP WA09 GSE105081.TFAP2C.WA09 190 bp overlap