Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

24 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 173 bp overlap

BRD4 6 datasets

ChIP CHL-1 GSE95585.BRD4.CHL-1 305 bp overlap

ChIP COLO-741 GSE73319.BRD4.COLO-741 262 bp overlap

ChIP HAP1 GSE108387.BRD4.HAP1 153 bp overlap

ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 235 bp overlap

ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 274 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 77 bp overlap

CRX 4 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 381 bp overlap

ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 313 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 411 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 453 bp overlap

CTCF 4 datasets

ChIP WERI-Rb-1 ENCFF349QKF 229 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 431 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 463 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 463 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 349 bp overlap

EZH2 1 dataset

ChIP neural progenitor cell ENCFF018MKA 405 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 341 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 384 bp overlap

ChIP DE DE-FOXA2-2 389 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 463 bp overlap

ChIP DE DE-GATA4-2 463 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 443 bp overlap

ChIP DE DE-GATA6-2 463 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 460 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 415 bp overlap

JUN 1 dataset

ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 65 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 430 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 306 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 435 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 463 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 372 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 463 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 339 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 359 bp overlap

NRL 1 dataset

ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 392 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 419 bp overlap

RAD21 2 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 253 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 305 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 434 bp overlap

SCRT1 1 dataset

ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 263 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 388 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 330 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 463 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 257 bp overlap

ZNF19 1 dataset

ChIP HEK293T GSE78099.ZNF19.HEK293T 294 bp overlap

ZNF341 1 dataset

ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 256 bp overlap

Genome Browser