chr16 : 14,981,300 14,981,748
448 bp 26 TFs 2 linked genes
This 448 bp open chromatin element is linked to PDXDC1 and ENSG00000261819 and is bound by 26 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PDXDC1 6.2 kb Proximal Proximity
ENSG00000261819 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:14,976,300 – 14,986,748
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 318 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 98 bp overlap
ARID1A 3 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 218 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 395 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 223 bp overlap
ARID2 1 dataset
ChIP MCF-7_parental GSE123284.ARID2.MCF-7_parental 294 bp overlap
ESR1 6 datasets
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 219 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 224 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 242 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 221 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 263 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 89 bp overlap
FOXA1 12 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 309 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 301 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 302 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 306 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 263 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 250 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 296 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 301 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 292 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 220 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 293 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 301 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 448 bp overlap
ChIP DE DE-FOXA2-2 448 bp overlap
GATA3 11 datasets
ChIP MCF-7 ENCFF178GBS 152 bp overlap
ChIP MCF-7 ENCFF178GBS 438 bp overlap
ChIP MCF-7 ENCFF352QVM 207 bp overlap
ChIP MCF-7 ENCFF437NQS 198 bp overlap
ChIP MCF-7 ENCFF695MAU 148 bp overlap
ChIP MCF-7 ENCFF695MAU 443 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 318 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 319 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 242 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 309 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 84 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 448 bp overlap
ChIP DE DE-GATA4-2 448 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 303 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 448 bp overlap
ChIP DE DE-GATA6-2 448 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 411 bp overlap
ChIP foregut GSE117136.GATA6.foregut 293 bp overlap
GRHL2 3 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 163 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 210 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 225 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 170 bp overlap
ChIP K562 ENCFF055GAZ 422 bp overlap
ChIP K562 ENCFF317JJX 417 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 128 bp overlap
NR3C1 3 datasets
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 183 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 164 bp overlap
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 101 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 123 bp overlap
ChIP HEK293 ENCFF875BDB 321 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 331 bp overlap
PGR 3 datasets
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 108 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 148 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 314 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 320 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 349 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 291 bp overlap
SMARCB1 4 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 297 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 318 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 304 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 225 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 409 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 448 bp overlap
TCF7L2 2 datasets
ChIP MCF-7 ENCFF219LIX 198 bp overlap
ChIP MCF-7 ENCFF219LIX 403 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 262 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 198 bp overlap
ChIP HepG2 ENCFF479ZIQ 448 bp overlap
ChIP HepG2 ENCFF479ZIQ 163 bp overlap
ZNF549 1 dataset
ChIP HEK293 ENCFF528IUI 66 bp overlap