Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

36 transcription factors

Arid3a 2 datasets

Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap

Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap

BHLHE22 2 datasets

Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap

Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap

DUX4 1 dataset

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

Dux 2 datasets

Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

ESR1 1 dataset

ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 138 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 464 bp overlap

ChIP DE DE-FOXA2-2 464 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 464 bp overlap

ChIP DE DE-GATA4-2 464 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-1 464 bp overlap

ChIP DE DE-GATA6-2 464 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 464 bp overlap

GFI1 1 dataset

Motif DE_48h DE_48h-GFI1_MA0038.3 11 bp overlap

Gfi1B 1 dataset

Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap

HAND2 2 datasets

Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

Hic1 1 dataset

Motif DE_48h DE_48h-Hic1_MA0739.2 8 bp overlap

ISL2 1 dataset

Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap

NFIA 1 dataset

Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap

NFYA 1 dataset

Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap

NFYB 1 dataset

Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap

NFYC 1 dataset

Motif DE_48h DE_48h-NFYC_MA1644.2 7 bp overlap

Neurod2 2 datasets

Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap

Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap

Nkx3-2 1 dataset

Motif DE_48h DE_48h-Nkx3-2_MA0122.4 10 bp overlap

Olig2 2 datasets

Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap

Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap

Ptf1A 2 datasets

Motif DE_48h DE_48h-Ptf1A_MA1619.2 8 bp overlap

Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap

SETDB1 3 datasets

ChIP HEK293 ENCFF676PLV 464 bp overlap

ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 402 bp overlap

ChIP U2OS ENCSR000EYD.SETDB1.U2OS 402 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 234 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 332 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 352 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 456 bp overlap

Six3 2 datasets

Motif DE_48h DE_48h-Six3_MA0631.2 11 bp overlap

Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap

Sox6 1 dataset

Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap

TFAP4 2 datasets

Motif DE_48h DE_48h-TFAP4_MA0691.1 10 bp overlap

Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap

TFAP4::FLI1 2 datasets

Motif DE_48h DE_48h-TFAP4FLI1_MA1967.2 14 bp overlap

Motif DE_60h DE_60h-TFAP4FLI1_MA1967.2 14 bp overlap

THRB 2 datasets

Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap

Motif DE_60h DE_60h-THRB_MA1576.2 18 bp overlap

Tcf12 2 datasets

Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap

Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap

Thap11 2 datasets

Motif DE_48h DE_48h-Thap11_MA1573.2 14 bp overlap

Motif DE_60h DE_60h-Thap11_MA1573.2 14 bp overlap

Twist2 2 datasets

Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap

Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap

ZIM3 1 dataset

Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap

ZNF317 2 datasets

Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap

Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap

Genome Browser