chr1 : 219,342,152 219,342,618
466 bp 22 TFs 0 linked genes
This 466 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:219,337,152 – 219,347,618
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 209 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 54 bp overlap
CTCF 3 datasets
ChIP GM23338 ENCFF832KWE 293 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 53 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 95 bp overlap
Dmrt1 1 dataset
Motif DE_60h DE_60h-Dmrt1_MA1603.2 9 bp overlap
E2F7 1 dataset
Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 150 bp overlap
EZH2 1 dataset
ChIP SF8628 GSE94834.EZH2.SF8628 261 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 391 bp overlap
ChIP DE DE-FOXA2-2 466 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 466 bp overlap
ChIP DE DE-GATA4-2 466 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 453 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 359 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 409 bp overlap
ChIP DE DE-GATA6-2 442 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 320 bp overlap
ChIP foregut GSE117136.GATA6.foregut 439 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 262 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 409 bp overlap
Nr2e3 1 dataset
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 395 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX21 1 dataset
Motif DE_60h DE_60h-SOX21_MA0866.1 15 bp overlap
Sox11 1 dataset
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
TCF7L2 1 dataset
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
THRB 1 dataset
Motif DE_60h DE_60h-THRB_MA1576.2 18 bp overlap
ZBTB26 1 dataset
Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap
ZNF16 1 dataset
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
ZNF324 1 dataset
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
ZSCAN4 1 dataset
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap