Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

33 transcription factors

BRD3 2 datasets

ChIP H-1_DE GSE126661.BRD3.H-1_DE 177 bp overlap

ChIP H-1_DE GSE126661.BRD3.H-1_DE 146 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 276 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 305 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 586 bp overlap

ChIP DE DE-FOXA2-2 495 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 629 bp overlap

ChIP DE DE-GATA4-2 629 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 629 bp overlap

ChIP DE DE-GATA6-2 629 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 587 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 541 bp overlap

IRF6 1 dataset

Motif DE_48h DE_48h-IRF6_MA1509.1 9 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 611 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 300 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 179 bp overlap

POU1F1 1 dataset

Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_48h DE_48h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap

POU3F1 1 dataset

Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 245 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 629 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 616 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 434 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 319 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 196 bp overlap

SOX10 1 dataset

Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 445 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 539 bp overlap

SOX21 1 dataset

Motif DE_48h DE_48h-SOX21_MA0866.1 15 bp overlap

SOX4 1 dataset

Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap

STAT1::STAT2 1 dataset

Motif DE_48h DE_48h-STAT1STAT2_MA0517.2 13 bp overlap

Sox5 1 dataset

Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 199 bp overlap

TRIM28 2 datasets

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 262 bp overlap

ChIP hESC GSE115387.TRIM28.hESC 98 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 417 bp overlap

ZNF410 1 dataset

Motif DE_48h DE_48h-ZNF410_MA0752.2 16 bp overlap

Genome Browser