chr12 : 58,552,528 58,552,698
170 bp 22 TFs 0 linked genes
This 170 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:58,547,528 – 58,557,698
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 128 bp overlap
ChIP VCaP GSE148358.AR.VCaP 160 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 170 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 157 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 101 bp overlap
EZH2 1 dataset
ChIP hepatocyte ENCFF118DKH 170 bp overlap
FOXA1 6 datasets
ChIP LNCaP GSE64656.FOXA1.LNCaP 170 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 148 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 144 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 170 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 136 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 170 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 167 bp overlap
ChIP DE DE-FOXA2-1 170 bp overlap
ChIP DE DE-FOXA2-2 170 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 170 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 170 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 170 bp overlap
GATA3 1 dataset
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 170 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 170 bp overlap
ChIP DE DE-GATA4-2 170 bp overlap
ChIP foregut GSE117136.GATA4.foregut 170 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 170 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 170 bp overlap
GATA6 9 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 165 bp overlap
ChIP DE DE-GATA6-1 170 bp overlap
ChIP DE DE-GATA6-2 170 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 170 bp overlap
ChIP H9 ERP004206.GATA6.H9 170 bp overlap
ChIP foregut GSE117136.GATA6.foregut 170 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 170 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 170 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 170 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 79 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 170 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 170 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 170 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 88 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 170 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 170 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 161 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 123 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 170 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 170 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 170 bp overlap