chr12 : 45,725,008 45,725,200
192 bp 21 TFs 3 linked genes
This 192 bp open chromatin element is linked to LINC00938, ENSG00000289229, and ARID2 and is bound by 21 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
LINC00938 2.7 kb Proximal Proximity
ENSG00000289229 3.6 kb Proximal Proximity
ARID2 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:45,720,008 – 45,730,200
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 58 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 135 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 192 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 192 bp overlap
ChIP DE DE-FOXA2-1 192 bp overlap
ChIP DE DE-FOXA2-2 192 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 143 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 128 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 192 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 168 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 123 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 159 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 174 bp overlap
ChIP DE DE-GATA4-1 192 bp overlap
ChIP DE DE-GATA4-2 192 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 192 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 192 bp overlap
ChIP foregut GSE117136.GATA4.foregut 192 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 192 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 136 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 192 bp overlap
ChIP DE DE-GATA6-2 192 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 192 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 192 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 192 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 192 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 192 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 192 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 192 bp overlap
ChIP foregut GSE117136.GATA6.foregut 192 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 192 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 192 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 166 bp overlap
KMT2A 2 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 95 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 143 bp overlap
MEN1 2 datasets
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 85 bp overlap
ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 192 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 79 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 186 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 192 bp overlap
RAD21 2 datasets
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 104 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 97 bp overlap
SIN3A 1 dataset
ChIP HCT116 ENCFF203YBB 50 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 192 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 192 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 192 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 192 bp overlap