chr12 : 26,116,509 26,116,834
325 bp 18 TFs 3 linked genes
This 325 bp open chromatin element is linked to SSPN, BHLHE41, and ENSG00000256894 and is bound by 18 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
SSPN 5.2 kb Proximal Proximity
BHLHE41 8.2 kb Proximal Proximity
ENSG00000256894 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:26,111,509 – 26,121,834
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
BACH1 1 dataset
ChIP K562 ENCFF419VIM 120 bp overlap
BRD4 1 dataset
ChIP MM1-S GSE45984.BRD4.MM1-S 208 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 174 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 263 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 301 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 325 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 325 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 263 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 325 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 325 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 244 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 68 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 102 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 222 bp overlap
POLR2A 1 dataset
ChIP esophagus muscularis mucosa ENCFF791ZXN 157 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 248 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 231 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 325 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 275 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 325 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 264 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 298 bp overlap
ChIP HEK293 ENCFF308WOW 228 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 325 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 252 bp overlap