chr12 : 16,610,001 16,610,339
338 bp 15 TFs 1 linked gene
This 338 bp open chromatin element is linked to LMO3 and is bound by 15 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LMO3 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:16,605,001 – 16,615,339
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 160 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 177 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 110 bp overlap
BRD4 2 datasets
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 70 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 94 bp overlap
EP300 2 datasets
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 107 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 109 bp overlap
EZH2 4 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 163 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 263 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 236 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 174 bp overlap
FOXA1 3 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 124 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 98 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 126 bp overlap
JUN 1 dataset
ChIP ESC S24-ESC-d0-JUN-exp1 284 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 88 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 338 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 230 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 120 bp overlap
POLR2A 12 datasets
ChIP GM18951 ENCFF079KKO 338 bp overlap
ChIP GM18951 ENCFF079KKO 279 bp overlap
ChIP GM19193 ENCFF599VTO 328 bp overlap
ChIP GM19193 ENCFF599VTO 336 bp overlap
ChIP body of pancreas ENCFF501FEC 186 bp overlap
ChIP body of pancreas ENCFF727UBE 243 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 328 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 195 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 338 bp overlap
ChIP sigmoid colon ENCFF748YVT 338 bp overlap
ChIP thyroid gland ENCFF979LRR 338 bp overlap
ChIP thyroid gland ENCFF979LRR 114 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 338 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 86 bp overlap