chr11 : 113,376,850 – 113,377,697
847 bp 24 TFs 1 linked gene
This 847 bp open chromatin element is linked to ENSG00000270179 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000270179 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:113,371,850 – 113,382,697
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
AR 21 datasets
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 207 bp overlap
ChIP DU145_FOXA1_ARQ6540X GSE47987.AR.DU145_FOXA1_ARQ6540X 246 bp overlap
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 124 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 160 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 190 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 259 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 171 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 211 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 214 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 206 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 205 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 275 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 398 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 396 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 185 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 141 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 202 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 214 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 318 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 289 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 313 bp overlap
ARNTL 1 dataset
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 362 bp overlap
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 194 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 222 bp overlap
CLOCK 1 dataset
ChIP BA40_0 GSE96659.CLOCK.BA40_0 183 bp overlap
CTCF 40 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 117 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 246 bp overlap
ChIP A673 ENCFF123WOM 313 bp overlap
ChIP C4-2B ENCFF821XVN 469 bp overlap
ChIP Caco-2 ENCFF753NZV 289 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 271 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 164 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 148 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 103 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 159 bp overlap
ChIP GM12873 ENCFF711LOS 187 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 127 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 173 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 152 bp overlap
ChIP HCT116 ENCFF209YMI 205 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 106 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 119 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 64 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 190 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 210 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 131 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 131 bp overlap
ChIP MCF 10A ENCFF988BGF 129 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 181 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 144 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 204 bp overlap
ChIP endodermal cell ENCFF471YCZ 302 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 109 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 185 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 156 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 136 bp overlap
ChIP keratinocyte ENCFF667ULX 266 bp overlap
ChIP keratinocyte ENCFF805QIE 259 bp overlap
ChIP keratinocyte ENCFF805QIE 361 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 281 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 192 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 241 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 264 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 167 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 170 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 434 bp overlap
ESR1 2 datasets
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 273 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 243 bp overlap
FOXA1 7 datasets
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 165 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 166 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 180 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 125 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 198 bp overlap
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 173 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 205 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 796 bp overlap
ChIP DE DE-FOXA2-2 787 bp overlap
GATA3 2 datasets
ChIP T-47D GSE51274.GATA3.T-47D 236 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 214 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 326 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 243 bp overlap
ChIP DE DE-GATA4-1 847 bp overlap
ChIP DE DE-GATA4-2 847 bp overlap
ChIP foregut GSE117136.GATA4.foregut 649 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 677 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 847 bp overlap
ChIP DE DE-GATA6-2 847 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 440 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 579 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 575 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 628 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 584 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 547 bp overlap
ChIP foregut GSE117136.GATA6.foregut 612 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 407 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 264 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 130 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 169 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 352 bp overlap
PGR 8 datasets
ChIP T-47D GSE31129.PGR.T-47D 344 bp overlap
ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 215 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 392 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 357 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 388 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 372 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 284 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 219 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 462 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 357 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 279 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 456 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 387 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 250 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 522 bp overlap
ZNF664 1 dataset
ChIP HEK293 ENCFF343XSW 86 bp overlap
Huangfu Lab · Publications · Resources · Contact