chr11 : 78,494,782 78,495,377
595 bp 21 TFs 2 linked genes
This 595 bp open chromatin element is linked to GAB2 and NARS2 and is bound by 21 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GAB2 77.3 kb Distal Multiome
NARS2 79.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:78,489,782 – 78,500,377
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 409 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 233 bp overlap
FOXA1 2 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 250 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 103 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 544 bp overlap
ChIP DE DE-FOXA2-2 522 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 113 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 501 bp overlap
ChIP DE DE-GATA4-2 538 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 454 bp overlap
ChIP DE DE-GATA6-2 540 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 461 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 500 bp overlap
HIF1A 1 dataset
ChIP NCI-H1299 GSE76770.HIF1A.NCI-H1299 144 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 276 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 159 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 233 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 192 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 192 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 194 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 224 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 248 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 595 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 380 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 281 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 329 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 595 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 529 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 190 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 309 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 429 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 114 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 269 bp overlap