chr1 : 200,659,696 – 200,659,889
193 bp 20 TFs 1 linked gene
This 193 bp open chromatin element is linked to DDX59-AS1 and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DDX59-AS1 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:200,654,696 – 200,664,889
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE120058.ARID1A.RMG-I 193 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 193 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 168 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 193 bp overlap
BRD4 2 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 193 bp overlap
ChIP HCC1806_DMSO_24h GSE87418.BRD4.HCC1806_DMSO_24h 174 bp overlap
CREBBP 2 datasets
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 192 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 112 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 193 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 70 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 62 bp overlap
ChIP DE DE-FOXA2-1 104 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 53 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 53 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 149 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 143 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 58 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 160 bp overlap
MED1 2 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 193 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 176 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 193 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 126 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 193 bp overlap
RELA 2 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 95 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 193 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 193 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 193 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 63 bp overlap
TEAD4 1 dataset
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 56 bp overlap
TP63 2 datasets
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 193 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 95 bp overlap
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