chr11 : 40,197,189 40,197,887
698 bp 20 TFs 0 linked genes
This 698 bp open chromatin element has no linked target genes and is bound by 20 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:40,192,189 – 40,202,887
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 192 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 289 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 477 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 363 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 282 bp overlap
ChIP hESC GSE26097.EOMES.hESC 173 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 601 bp overlap
ChIP DE DE-FOXA2-2 698 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 228 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 166 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 698 bp overlap
ChIP DE DE-GATA4-2 698 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 618 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 369 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 698 bp overlap
ChIP DE DE-GATA6-2 698 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 320 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 379 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 698 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 503 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 325 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 698 bp overlap
ChIP foregut GSE117136.GATA6.foregut 286 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 317 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 117 bp overlap
MYCN 1 dataset
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 128 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 470 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 316 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 547 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 258 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 124 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 296 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 255 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 379 bp overlap
TAL1 1 dataset
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 118 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 154 bp overlap