Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

32 transcription factors

CUX1 1 dataset

Motif DE_48h DE_48h-CUX1_MA0754.3 9 bp overlap

CUX2 1 dataset

Motif DE_48h DE_48h-CUX2_MA0755.2 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 457 bp overlap

ChIP DE DE-FOXA2-2 415 bp overlap

GATA2 1 dataset

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 457 bp overlap

ChIP DE DE-GATA4-2 457 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

GATA5 1 dataset

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 448 bp overlap

ChIP DE DE-GATA6-2 457 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 451 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 450 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 433 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 457 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 384 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 433 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 345 bp overlap

Gata3 1 dataset

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

Mecom 1 dataset

Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap

NUTM1 1 dataset

ChIP NMC24335 GSE96775.NUTM1.NMC24335 103 bp overlap

ONECUT1 4 datasets

Motif DE_48h DE_48h-ONECUT1_MA0679.3 9 bp overlap

ChIP H9 ERP004206.ONECUT1.H9 195 bp overlap

ChIP HepG2 ENCFF243FIR 341 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 318 bp overlap

ONECUT2 1 dataset

Motif DE_48h DE_48h-ONECUT2_MA0756.3 8 bp overlap

POU1F1 1 dataset

Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_48h DE_48h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 310 bp overlap

POU5F1B 1 dataset

Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap

SMAD2 1 dataset

Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 336 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 354 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 301 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 334 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 425 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 442 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 457 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 457 bp overlap

SMC1A 1 dataset

ChIP LCL GSE38395.SMC1A.LCL 98 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 238 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 315 bp overlap

TRPS1 1 dataset

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

ZNF70 1 dataset

ChIP SK-N-SH ENCFF833ACX 95 bp overlap

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