chr9 : 119,553,111 119,553,259
148 bp 23 TFs 0 linked genes
This 148 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:119,548,111 – 119,558,259
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
CTCF 13 datasets
ChIP GM04648 GSE148179.CTCF.GM04648 148 bp overlap
ChIP GM23338 ENCFF531QOI 148 bp overlap
ChIP GM23338 ENCFF531QOI 72 bp overlap
ChIP GM23338 ENCFF832KWE 148 bp overlap
ChIP H1 ENCFF764RHO 148 bp overlap
ChIP H9 ENCFF152GTF 148 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 106 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 126 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 148 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 148 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 106 bp overlap
ChIP endodermal cell ENCFF471YCZ 148 bp overlap
ChIP heart left ventricle ENCFF888ERQ 148 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 148 bp overlap
ChIP DE DE-FOXA2-2 148 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 148 bp overlap
ChIP DE DE-GATA4-2 148 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 148 bp overlap
ChIP DE DE-GATA6-2 148 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
MYBL1 1 dataset
Motif DE_12h DE_12h-MYBL1_MA0776.1 12 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 148 bp overlap
ChIP H1 ENCFF967OJF 148 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 148 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 86 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 148 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 123 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 59 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap