chr9 : 99,359,230 99,359,669
439 bp 24 TFs 1 linked gene
This 439 bp open chromatin element is linked to ENSG00000287955 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000287955 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:99,354,230 – 99,364,669
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
AR 3 datasets
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 106 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 105 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 113 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 240 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 231 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 263 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 187 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 264 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 268 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 198 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 147 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 439 bp overlap
ChIP DE DE-GATA4-2 425 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 439 bp overlap
ChIP DE DE-GATA6-2 439 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 357 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 376 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 320 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 175 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94782.MYCN.Kelly 106 bp overlap
PGR 2 datasets
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 65 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 62 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 252 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 425 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 394 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 336 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 241 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 376 bp overlap
TAL1 2 datasets
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 200 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 161 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 152 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 120 bp overlap