chr8 : 85,466,062 85,466,452
390 bp 16 TFs 2 linked genes
This 390 bp open chromatin element is linked to CA2 and CA3-AS1 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CA2 2.1 kb Proximal Proximity
CA3-AS1 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:85,461,062 – 85,471,452
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 54 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
EZH2 1 dataset
ChIP KG-1_shPLZF GSE109619.EZH2.KG-1_shPLZF 338 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 275 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 176 bp overlap
GATA1 2 datasets
ChIP erythroblast ENCFF867JAR 70 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 296 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 175 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 228 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 390 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 295 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 317 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 188 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 336 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 390 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 287 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 363 bp overlap
MEN1 2 datasets
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 390 bp overlap
ChIP MOLM-13 GSE149183.MEN1.MOLM-13 390 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 53 bp overlap
RAD21 1 dataset
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 178 bp overlap
RNF2 4 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 68 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 390 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 152 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 130 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 257 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 390 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 184 bp overlap