chr1 : 165,441,235 165,441,973
738 bp 26 TFs 1 linked gene
This 738 bp open chromatin element is linked to RXRG and is bound by 26 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RXRG 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:165,436,235 – 165,446,973
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 172 bp overlap
BRD4 3 datasets
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 141 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 378 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 194 bp overlap
CRX 2 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 192 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 337 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 110 bp overlap
ChIP BLaER1 ENCFF335XTP 209 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 280 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 246 bp overlap
EZH2 8 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 285 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 738 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 478 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 60 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 129 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 280 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 238 bp overlap
ChIP neural progenitor cell ENCFF018MKA 472 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 501 bp overlap
ChIP DE DE-FOXA2-2 431 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 467 bp overlap
ChIP DE DE-GATA4-2 522 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 360 bp overlap
ChIP DE DE-GATA6-2 506 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 178 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 137 bp overlap
MED1 2 datasets
ChIP RH4 GSE83726.MED1.RH4 52 bp overlap
ChIP RH4 GSE83726.MED1.RH4 216 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 172 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 177 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 264 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 442 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 418 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 414 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 169 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 191 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 270 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 345 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 101 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 387 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 724 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 222 bp overlap