chr1 : 156,428,917 156,429,153
236 bp 16 TFs 2 linked genes
This 236 bp open chromatin element is linked to MIR9-1 and MIR9-1HG and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MIR9-1 8.5 kb Proximal Proximity
MIR9-1HG 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:156,423,917 – 156,434,153
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 183 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 72 bp overlap
ERG 3 datasets
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 118 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 112 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 120 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 110 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 151 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 110 bp overlap
EZH2 14 datasets
ChIP GM23338 ENCFF613YON 189 bp overlap
ChIP GM23338 ENCFF613YON 196 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 194 bp overlap
ChIP OCI-LY3 ENCFF337OPQ 236 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 236 bp overlap
ChIP T98G GSE112240.EZH2.T98G 184 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 216 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 133 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 236 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 187 bp overlap
ChIP fibroblast of lung ENCFF479BAW 236 bp overlap
ChIP fibroblast of lung ENCFF479BAW 236 bp overlap
ChIP neural progenitor cell ENCFF018MKA 236 bp overlap
ChIP neural progenitor cell ENCFF018MKA 213 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 60 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 200 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 58 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 236 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 213 bp overlap
RNF2 1 dataset
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 233 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 158 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 236 bp overlap
SUZ12 2 datasets
ChIP LNCaP GSE39459.SUZ12.LNCaP 105 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 236 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 79 bp overlap