Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

27 transcription factors

DPRX 1 dataset

Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap

DUX4 1 dataset

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 176 bp overlap

ChIP hESC GSE26097.EOMES.hESC 290 bp overlap

ESR1 1 dataset

ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 68 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 580 bp overlap

ChIP DE DE-FOXA2-2 487 bp overlap

GATA1 1 dataset

Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap

GATA2 3 datasets

Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 580 bp overlap

ChIP DE DE-GATA4-2 559 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA6 12 datasets

ChIP DE DE-GATA6-1 580 bp overlap

ChIP DE DE-GATA6-2 548 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 370 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 339 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 309 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 580 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 417 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 394 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 580 bp overlap

GRHL1 1 dataset

Motif DE_48h DE_48h-GRHL1_MA0647.2 10 bp overlap

GRHL2 1 dataset

Motif DE_48h DE_48h-GRHL2_MA1105.3 8 bp overlap

Gata3 3 datasets

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HNF4A 2 datasets

Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap

Motif DE_48h DE_48h-HNF4A_MA0114.5 9 bp overlap

HNF4G 2 datasets

Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap

Motif DE_48h DE_48h-HNF4G_MA0484.3 9 bp overlap

Isl1 1 dataset

Motif DE_48h DE_48h-Isl1_MA1608.2 7 bp overlap

MSC 1 dataset

Motif DE_48h DE_48h-MSC_MA0665.1 10 bp overlap

NKX6-3 1 dataset

Motif DE_48h DE_48h-NKX6-3_MA1530.2 8 bp overlap

Rarg 2 datasets

Motif DE_36h DE_36h-Rarg_MA0860.1 17 bp overlap

Motif DE_48h DE_48h-Rarg_MA0860.1 17 bp overlap

SCRT1 1 dataset

Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap

SCRT2 1 dataset

Motif DE_48h DE_48h-SCRT2_MA0744.3 10 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 471 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 210 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 283 bp overlap

SPIB 1 dataset

Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap

TEAD4 1 dataset

ChIP SNU-216 GSE44416.TEAD4.SNU-216 193 bp overlap

TRPS1 3 datasets

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZNF354A 1 dataset

Motif DE_48h DE_48h-ZNF354A_MA1978.2 20 bp overlap

ZNF675 1 dataset

Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap

Genome Browser