chr6 : 157,708,186 157,708,676
490 bp 16 TFs 3 linked genes
This 490 bp open chromatin element is linked to SNX9, SYNJ2, and ZDHHC14 and is bound by 16 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
SNX9 114.8 kb Distal Multiome
SYNJ2 273.4 kb Distal Multiome
ZDHHC14 327.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:157,703,186 – 157,713,676
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP K562 ENCFF751HCS 456 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 144 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 328 bp overlap
GATA2 2 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 278 bp overlap
ChIP K562 ENCFF830LLA 490 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 204 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 216 bp overlap
ChIP K562 ENCFF731XJJ 425 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 293 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 434 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 438 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 490 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 490 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 218 bp overlap
ChIP hESC GSE18292.NANOG.hESC 179 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 203 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 234 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 386 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 432 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 248 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 338 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 98 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 330 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 86 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 86 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 70 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 142 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 70 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 142 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 213 bp overlap
ZNF318 1 dataset
ChIP K562 ENCFF696TLC 191 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 180 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 83 bp overlap