chr6 : 123,610,664 123,611,130
466 bp 45 TFs 0 linked genes
This 466 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:123,605,664 – 123,616,130
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 152 bp overlap
BARX1 1 dataset
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 233 bp overlap
DLX1 1 dataset
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
EN2 1 dataset
Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 281 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 382 bp overlap
ChIP DE DE-FOXA2-2 386 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 367 bp overlap
ChIP DE DE-GATA4-2 466 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 387 bp overlap
ChIP DE DE-GATA6-2 431 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 338 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 274 bp overlap
GBX1 1 dataset
Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
KLF9 1 dataset
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
LBX1 1 dataset
Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap
MGA 1 dataset
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
MSX1 1 dataset
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
Nobox 1 dataset
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
PRRX2 1 dataset
Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 208 bp overlap
RAX 1 dataset
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
SMAD2 1 dataset
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 442 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 466 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 376 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 264 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 299 bp overlap
TAL1 3 datasets
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 92 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 141 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 168 bp overlap
TBX1 1 dataset
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX5 1 dataset
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 95 bp overlap
ZNF418 1 dataset
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF8 1 dataset
Motif DE_60h DE_60h-ZNF8_MA1718.1 20 bp overlap