chr5 : 158,380,674 158,381,060
386 bp 61 TFs 0 linked genes
This 386 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:158,375,674 – 158,386,060
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 107 bp overlap
Arx 1 dataset
Motif DE_48h DE_48h-Arx_MA0874.2 10 bp overlap
BARX1 1 dataset
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
BRD4 1 dataset
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 386 bp overlap
BSX 1 dataset
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
Bcl11B 1 dataset
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
CTCF 1 dataset
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 287 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 103 bp overlap
DLX1 1 dataset
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Dlx2 1 dataset
Motif DE_48h DE_48h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_48h DE_48h-Dlx5_MA1476.3 8 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 148 bp overlap
EN2 1 dataset
Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 247 bp overlap
FIGLA 1 dataset
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 289 bp overlap
GBX1 1 dataset
Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
IRF2 1 dataset
Motif DE_48h DE_48h-IRF2_MA0051.2 16 bp overlap
IRF4 1 dataset
Motif DE_48h DE_48h-IRF4_MA1419.2 14 bp overlap
IRF7 1 dataset
Motif DE_48h DE_48h-IRF7_MA0772.2 13 bp overlap
LBX1 1 dataset
Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap
Lhx1 1 dataset
Motif DE_48h DE_48h-Lhx1_MA1518.3 10 bp overlap
MSX1 1 dataset
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
MYOD1 2 datasets
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
Msx3 1 dataset
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 165 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 94 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 297 bp overlap
Nobox 1 dataset
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
PHOX2A 1 dataset
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 311 bp overlap
PROP1 1 dataset
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
PRRX2 1 dataset
Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap
Prdm5 1 dataset
Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap
RAX 1 dataset
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 324 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 188 bp overlap
SNAI2 2 datasets
Motif DE_48h DE_48h-SNAI2_MA0745.3 8 bp overlap
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 312 bp overlap
SNAI3 1 dataset
Motif DE_48h DE_48h-SNAI3_MA1559.2 9 bp overlap
SREBF1 1 dataset
ChIP KYSE-150 GSE143803.SREBF1.KYSE-150 258 bp overlap
TBX18 1 dataset
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TP53 1 dataset
Motif DE_48h DE_48h-TP53_MA0106.3 18 bp overlap
TP63 5 datasets
Motif DE_48h DE_48h-TP63_MA0525.2 18 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 183 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 240 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 149 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 172 bp overlap
TP73 1 dataset
Motif DE_48h DE_48h-TP73_MA0861.2 16 bp overlap
ZEB1 1 dataset
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZNF410 1 dataset
Motif DE_48h DE_48h-ZNF410_MA0752.2 16 bp overlap
ZNF667 1 dataset
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap