chr5 : 154,138,796 154,139,374
578 bp 30 TFs 0 linked genes
This 578 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:154,133,796 – 154,144,374
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 162 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 248 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 101 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 368 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 155 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 266 bp overlap
FOXA1 1 dataset
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 92 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 524 bp overlap
ChIP DE DE-FOXA2-2 578 bp overlap
ChIP HepG2 ENCFF570ABM 104 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 550 bp overlap
ChIP DE DE-GATA4-2 578 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 527 bp overlap
ChIP DE DE-GATA6-2 559 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 578 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 578 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 554 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 578 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 578 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 578 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 543 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 243 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 317 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 219 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 236 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 156 bp overlap
PGR 1 dataset
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 59 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 159 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 291 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 387 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 523 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 337 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 398 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 307 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 248 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 185 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 199 bp overlap
SMARCA4 4 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 275 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 212 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 187 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 192 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 174 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 434 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 519 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 369 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 330 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 95 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 117 bp overlap
ChIP K562 ENCFF281INV 226 bp overlap
ZNF449 3 datasets
ChIP HEK293 ENCFF764ZIC 307 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 408 bp overlap
ChIP HEK293 GSE76494.ZNF449.HEK293 182 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 397 bp overlap
ZSCAN16 3 datasets
ChIP HEK293 ENCFF533NFT 183 bp overlap
ChIP HEK293 ENCSR864VJE.ZSCAN16.HEK293 328 bp overlap
ChIP HEK293 GSE76494.ZSCAN16.HEK293 209 bp overlap