chr5 : 64,770,235 64,770,535
300 bp 19 TFs 2 linked genes
This 300 bp open chromatin element is linked to CWC27 and SREK1IP1 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CWC27 1.3 kb Proximal Proximity
SREK1IP1 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:64,765,235 – 64,775,535
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 73 bp overlap
ATF4 2 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 74 bp overlap
ChIP K562 ENCFF674KTF 73 bp overlap
ATF7 1 dataset
ChIP MCF-7 ENCFF578WKB 54 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF783ADE 150 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 54 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 182 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 300 bp overlap
ChIP DE DE-FOXA2-2 300 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 300 bp overlap
ChIP DE DE-GATA4-2 300 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 300 bp overlap
ChIP DE DE-GATA6-2 300 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 300 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 300 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 297 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 300 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 74 bp overlap
RBFOX2 6 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 300 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 300 bp overlap
ChIP K562 ENCFF196WTG 236 bp overlap
ChIP K562 ENCFF196WTG 300 bp overlap
ChIP K562 ENCFF967GRF 236 bp overlap
ChIP K562 ENCFF967GRF 300 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 173 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 300 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 223 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 300 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 300 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 149 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 300 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap