chr5 : 54,060,933 54,061,304
371 bp 40 TFs 0 linked genes
This 371 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:54,055,933 – 54,066,304
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
BHLHE22 2 datasets
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap
Bhlha15 2 datasets
Motif DE_36h DE_36h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_48h DE_48h-Bhlha15_MA1472.3 8 bp overlap
CTCF 1 dataset
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 221 bp overlap
ESR2 2 datasets
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
Motif DE_48h DE_48h-ESR2_MA0258.2 15 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 245 bp overlap
ChIP DE DE-FOXA2-2 351 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 314 bp overlap
ChIP DE DE-GATA4-2 371 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 295 bp overlap
ChIP DE DE-GATA6-2 371 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 250 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 315 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 371 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 313 bp overlap
IKZF2 1 dataset
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
KLF17 1 dataset
Motif DE_48h DE_48h-KLF17_MA1514.2 14 bp overlap
MYF5 2 datasets
Motif DE_36h DE_36h-MYF5_MA1641.2 8 bp overlap
Motif DE_48h DE_48h-MYF5_MA1641.2 8 bp overlap
NEUROD1 2 datasets
Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_48h DE_48h-NEUROD1_MA1109.2 8 bp overlap
NR2C2 1 dataset
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_48h DE_48h-NR2F1_MA1537.2 13 bp overlap
Neurod2 4 datasets
Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Motif DE_48h DE_48h-Neurod2_MA0668.3 8 bp overlap
Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap
Nr2F6 1 dataset
Motif DE_48h DE_48h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 1 dataset
Motif DE_48h DE_48h-Nr2f6_MA0677.2 13 bp overlap
Olig2 2 datasets
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
Pparg::Rxra 3 datasets
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
Prdm5 1 dataset
Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap
Ptf1A 2 datasets
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_48h DE_48h-Ptf1A_MA1619.2 8 bp overlap
RFX1 1 dataset
Motif DE_48h DE_48h-RFX1_MA0509.3 16 bp overlap
RFX3 1 dataset
Motif DE_48h DE_48h-RFX3_MA0798.3 16 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 245 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 370 bp overlap
Six3 1 dataset
Motif DE_48h DE_48h-Six3_MA0631.2 11 bp overlap
Spi1 1 dataset
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
TFAP4::FLI1 2 datasets
Motif DE_36h DE_36h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif DE_48h DE_48h-TFAP4FLI1_MA1967.2 14 bp overlap
THRB 1 dataset
Motif DE_48h DE_48h-THRB_MA1574.2 13 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 106 bp overlap
Tcf12 2 datasets
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
ZBED2 1 dataset
Motif DE_48h DE_48h-ZBED2_MA1971.2 7 bp overlap
ZBTB18 2 datasets
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_48h DE_48h-ZBTB18_MA0698.2 11 bp overlap
ZNF135 1 dataset
Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap
ZNF454 1 dataset
Motif DE_48h DE_48h-ZNF454_MA1712.2 17 bp overlap
ZNF675 1 dataset
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
ZNF680 1 dataset
Motif DE_48h DE_48h-ZNF680_MA1729.2 11 bp overlap
Zfp809 1 dataset
Motif DE_48h DE_48h-Zfp809_MA2125.1 9 bp overlap
Zic2 2 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap