chr5 : 43,607,002 43,607,875
873 bp 24 TFs 2 linked genes
This 873 bp open chromatin element is linked to NNT-AS1 and NNT and is bound by 24 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
NNT-AS1 4.0 kb Proximal Proximity
NNT 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:43,602,002 – 43,612,875
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 224 bp overlap
CBX5 1 dataset
ChIP K562 ENCFF188CYP 317 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 358 bp overlap
ChIP BLaER1 ENCFF262VBH 278 bp overlap
ChIP BLaER1 ENCFF364PUR 252 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 283 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 217 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 480 bp overlap
NR2F1 2 datasets
Motif DE_60h DE_60h-NR2F1_MA0017.3 12 bp overlap
Motif DE_72h DE_72h-NR2F1_MA0017.3 12 bp overlap
Nr2F6 2 datasets
Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_72h DE_72h-Nr2F6_MA0728.1 15 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 354 bp overlap
Rarg 2 datasets
Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap
Motif DE_72h DE_72h-Rarg_MA0859.2 15 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 483 bp overlap
Sox6 2 datasets
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
TEAD1 1 dataset
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 179 bp overlap
TRIM28 3 datasets
ChIP K562 ENCFF429WPG 425 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 189 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 276 bp overlap
ZNF16 2 datasets
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
Motif DE_72h DE_72h-ZNF16_MA1654.2 21 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCFF778UKJ 321 bp overlap
ZNF677 2 datasets
ChIP HEK293 ENCFF220HCQ 166 bp overlap
ChIP HEK293 ENCSR279KDC.ZNF677.HEK293 213 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
ZNF700 1 dataset
ChIP K562 ENCFF657OXY 104 bp overlap
ZNF740 1 dataset
Motif DE_60h DE_60h-ZNF740_MA0753.3 10 bp overlap