Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

21 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 431 bp overlap

BRD4 4 datasets

ChIP HAP1 GSE108387.BRD4.HAP1 164 bp overlap

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 164 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 142 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 165 bp overlap

CTCF 2 datasets

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 357 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 318 bp overlap

FLI1 1 dataset

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 241 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 273 bp overlap

ChIP DE DE-FOXA2-2 381 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 319 bp overlap

GATA6 6 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 360 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 343 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 414 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 394 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 431 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 431 bp overlap

JUN 2 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 331 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 266 bp overlap

KLF4 1 dataset

ChIP HAP1 GSE130417.KLF4.HAP1 199 bp overlap

NFATC1 1 dataset

ChIP GM12878 ENCFF023CAZ 265 bp overlap

POLR2A 5 datasets

ChIP GM12878 ENCFF412KAE 328 bp overlap

ChIP GM12878 ENCFF521FXC 106 bp overlap

ChIP GM12891 ENCFF012SUT 431 bp overlap

ChIP GM12891 ENCFF379FCI 205 bp overlap

ChIP GM12892 ENCFF542ZFO 305 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 185 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 140 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 357 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 350 bp overlap

RAD21 3 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 366 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 392 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 192 bp overlap

RBPJ 2 datasets

ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 177 bp overlap

ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 181 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 336 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 431 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 431 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 431 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 431 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 428 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 428 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 357 bp overlap

SMARCA4 1 dataset

ChIP NSC GSE125033.SMARCA4.NSC 431 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 300 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 251 bp overlap

Genome Browser