chr4 : 185,021,798 185,022,029
231 bp 24 TFs 1 linked gene
This 231 bp open chromatin element is linked to HELT and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HELT 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:185,016,798 – 185,027,029
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 231 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 231 bp overlap
EZH2 15 datasets
ChIP A673 ENCFF790MVL 215 bp overlap
ChIP A673 ENCFF790MVL 231 bp overlap
ChIP A673 ENCFF955JRZ 215 bp overlap
ChIP H1 ENCFF232NZA 231 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 225 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 231 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 202 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 231 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 129 bp overlap
ChIP hepatocyte ENCFF552DZB 112 bp overlap
ChIP hepatocyte ENCFF552DZB 231 bp overlap
ChIP hepatocyte ENCFF552DZB 231 bp overlap
ChIP keratinocyte ENCFF070STK 171 bp overlap
ChIP neural progenitor cell ENCFF018MKA 231 bp overlap
ChIP neural progenitor cell ENCFF472NFV 231 bp overlap
FOXA1 6 datasets
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 193 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 179 bp overlap
ChIP HEK293_v5_TFS GSE123618.FOXA1.HEK293_v5_TFS 219 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 210 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 231 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 106 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 206 bp overlap
HDAC2 1 dataset
ChIP GM12878 ENCSR330OEO.HDAC2.GM12878 169 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCFF918SGD 57 bp overlap
NANOG 3 datasets
ChIP WA09 GSE105028.NANOG.WA09 225 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 174 bp overlap
ChIP hESC GSE18292.NANOG.hESC 218 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 186 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 231 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 231 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 231 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 231 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 231 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 231 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 231 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 103 bp overlap
SP3 1 dataset
ChIP HEK293 ENCFF087XLA 154 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 231 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 154 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 231 bp overlap
ChIP NT2/D1 ENCFF574SXS 216 bp overlap