chr1 : 81,377,500 – 81,377,687
187 bp 18 TFs 0 linked genes
This 187 bp open chromatin element has no linked target genes and is bound by 18 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:81,372,500 – 81,382,687
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CREB1 4 datasets
ChIP H1 ENCFF955PMP 187 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 187 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 141 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 147 bp overlap
CTCF 184 datasets
ChIP A-549 ENCSR000AUE.CTCF.A-549 187 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 187 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 187 bp overlap
ChIP BE2C ENCFF757SRF 187 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 175 bp overlap
ChIP C4-2B ENCFF821XVN 187 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 130 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 140 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 144 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 187 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 187 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 178 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 187 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 187 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 187 bp overlap
ChIP GM12865 ENCFF067GFI 187 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 108 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 132 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 153 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 114 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 155 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 161 bp overlap
ChIP GM12873 ENCFF711LOS 187 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 128 bp overlap
ChIP GM12875 ENCFF081UCQ 187 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 145 bp overlap
ChIP GM12878 ENCFF511URZ 187 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 187 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 159 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 158 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 125 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 187 bp overlap
ChIP GM23338 ENCFF531QOI 187 bp overlap
ChIP GM23338 ENCFF772DML 159 bp overlap
ChIP H1 ENCFF230QSV 158 bp overlap
ChIP H1 ENCFF414GZI 187 bp overlap
ChIP H1 ENCFF764RHO 175 bp overlap
ChIP H9 ENCFF152GTF 187 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 187 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 187 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 187 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 187 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 152 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 187 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 187 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 187 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 187 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 187 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 187 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 187 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 181 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 173 bp overlap
ChIP HCT116 ENCFF003KHP 187 bp overlap
ChIP HEK293 ENCFF498RMM 187 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 160 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 187 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 187 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 187 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 165 bp overlap
ChIP HeLa-S3 ENCFF565UFR 148 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 187 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 118 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 139 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 100 bp overlap
ChIP HepG2 ENCFF348BUL 187 bp overlap
ChIP HepG2 ENCFF757EKU 187 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 187 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 187 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 177 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 114 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 125 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 141 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 125 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 167 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 170 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 187 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 154 bp overlap
ChIP MCF-7 ENCFF139NQI 187 bp overlap
ChIP MCF-7 ENCFF198DQX 187 bp overlap
ChIP MCF-7 ENCFF210JUZ 187 bp overlap
ChIP MCF-7 ENCFF494VXA 187 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 187 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 182 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 163 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 126 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 182 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 187 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 174 bp overlap
ChIP PC-3 ENCFF487TUI 111 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 187 bp overlap
ChIP Panc1 ENCFF056JQX 187 bp overlap
ChIP Peyer's patch ENCFF701KWW 187 bp overlap
ChIP Peyer's patch ENCFF828IDE 187 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 187 bp overlap
ChIP SEM GSE117864.CTCF.SEM 119 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 171 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 87 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 187 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 164 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 132 bp overlap
ChIP UPCI-SCC-090 GSE143026.CTCF.UPCI-SCC-090 102 bp overlap
ChIP VCaP ENCFF858YQT 187 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 187 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 187 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 187 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 158 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 141 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 153 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 187 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 153 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 107 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 104 bp overlap
ChIP endodermal cell ENCFF471YCZ 187 bp overlap
ChIP endothelial cell ENCFF663LIE 187 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 178 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 187 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 187 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 187 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 139 bp overlap
ChIP hESC GSE20650.CTCF.hESC 130 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 187 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 155 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 187 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 146 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 187 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 187 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 187 bp overlap
ChIP heart ENCSR565HBN.CTCF.heart 187 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 187 bp overlap
ChIP heart left ventricle ENCFF244ZHV 187 bp overlap
ChIP heart left ventricle ENCFF354HOQ 155 bp overlap
ChIP heart left ventricle ENCFF440XFJ 187 bp overlap
ChIP heart left ventricle ENCFF548XHH 187 bp overlap
ChIP heart left ventricle ENCFF769GAB 187 bp overlap
ChIP heart left ventricle ENCFF832OXT 187 bp overlap
ChIP heart left ventricle ENCFF842XRG 187 bp overlap
ChIP heart left ventricle ENCFF888ERQ 187 bp overlap
ChIP heart right ventricle ENCFF022KFI 187 bp overlap
ChIP heart right ventricle ENCFF027ORH 187 bp overlap
ChIP heart right ventricle ENCFF063GTP 187 bp overlap
ChIP heart right ventricle ENCFF435TKW 180 bp overlap
ChIP heart right ventricle ENCFF725NNJ 187 bp overlap
ChIP heart right ventricle ENCFF767XJQ 187 bp overlap
ChIP heart right ventricle ENCFF979TCT 187 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 187 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 187 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 168 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 142 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 187 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 153 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 182 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 178 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 187 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 187 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 187 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 187 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 157 bp overlap
ChIP keratinocyte ENCFF046PBT 153 bp overlap
ChIP keratinocyte ENCFF291YDC 153 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 146 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 187 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 169 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 173 bp overlap
ChIP lung_left_upper-lobe ENCSR972LYL.CTCF.lung_left_upper-lobe 178 bp overlap
ChIP neural crest cell ENCFF182LWK 187 bp overlap
ChIP neural progenitor cell ENCFF420RBO 181 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 187 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 187 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 139 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 167 bp overlap
ChIP placenta ENCFF029PHY 187 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 182 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 159 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 154 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 187 bp overlap
ChIP right lobe of liver ENCFF011NDG 187 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 187 bp overlap
ChIP stomach ENCFF370OWL 187 bp overlap
ChIP stomach ENCSR185CCV.CTCF.stomach 187 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 165 bp overlap
ChIP transverse colon ENCFF653EYS 187 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 187 bp overlap
ChIP uterus ENCSR392SFJ.CTCF.uterus 137 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 149 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 155 bp overlap
HIF1A 1 dataset
ChIP macrophage_HYPO GSE43109.HIF1A.macrophage_HYPO 105 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 150 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 159 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 187 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 80 bp overlap
RAD21 38 datasets
ChIP GM12878 ENCFF046CBW 187 bp overlap
ChIP GM12878 ENCFF101UQZ 166 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 176 bp overlap
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 146 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 186 bp overlap
ChIP H1 ENCFF698EWO 180 bp overlap
ChIP H1 ENCFF967OJF 159 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 187 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 187 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 187 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 150 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 186 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 130 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF906QIS 187 bp overlap
ChIP HepG2 ENCFF963UBJ 187 bp overlap
ChIP Ishikawa ENCFF570JVV 176 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 172 bp overlap
ChIP MCF-7 ENCFF724VCQ 173 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 176 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 167 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 159 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 157 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 151 bp overlap
ChIP SK-N-SH ENCFF747MAS 187 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 138 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 187 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 187 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 187 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 187 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 187 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 187 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 187 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 187 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 187 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 187 bp overlap
ChIP liver ENCFF485PAC 187 bp overlap
ChIP liver ENCFF522JHE 187 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 114 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 139 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 187 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 107 bp overlap
STAG1 6 datasets
ChIP HeLa GSE126990.STAG1.HeLa 124 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 124 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 169 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 137 bp overlap
ChIP HepG2 ENCFF843EBZ 187 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 164 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 152 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 130 bp overlap
ZNF44 1 dataset
ChIP HEK293T GSE78099.ZNF44.HEK293T 134 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 155 bp overlap
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