chr4 : 134,465,505 – 134,465,736
231 bp 16 TFs 0 linked genes
This 231 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:134,460,505 – 134,470,736
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
BRD4 5 datasets
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 151 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 185 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 231 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 163 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CTCF 83 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 231 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 105 bp overlap
ChIP BE2C ENCFF757SRF 231 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 231 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 213 bp overlap
ChIP Caco-2 ENCFF934QYS 197 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 107 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 133 bp overlap
ChIP GM23338 ENCFF772DML 98 bp overlap
ChIP H1 ENCFF414GZI 213 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 231 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 229 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 213 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 174 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 231 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 135 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 104 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 174 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 167 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 186 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 138 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP MCF-7 ENCFF139NQI 224 bp overlap
ChIP MCF-7 ENCFF162GNE 217 bp overlap
ChIP MCF-7 ENCFF198DQX 208 bp overlap
ChIP MCF-7 ENCFF494VXA 208 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 215 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 208 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 174 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 181 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 136 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 125 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 220 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 149 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 178 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 229 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 231 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 231 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 199 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 231 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 189 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 169 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 224 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 142 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 164 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 210 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 231 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 153 bp overlap
ChIP brain ENCFF163BBN 231 bp overlap
ChIP brain ENCFF685VRG 231 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 231 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 201 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 231 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 231 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 208 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 231 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 144 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 231 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF595WAL 231 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 231 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 231 bp overlap
ChIP endodermal cell ENCFF471YCZ 200 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 231 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 231 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 225 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 231 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 189 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 155 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 163 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 176 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 175 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 209 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 231 bp overlap
ChIP islet ERP004003.CTCF.islet 170 bp overlap
ChIP neural progenitor cell ENCFF420RBO 231 bp overlap
ChIP neural progenitor cell ENCFF581WPG 231 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 197 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 213 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 179 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 165 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 218 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 231 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 231 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 231 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 231 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 230 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 223 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 231 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 215 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 225 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 176 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 180 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 146 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 96 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 90 bp overlap
RAD21 31 datasets
ChIP H1 ENCFF698EWO 157 bp overlap
ChIP H1 ENCFF967OJF 231 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 231 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 231 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 182 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 181 bp overlap
ChIP HCT116 ENCFF568PEO 231 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 231 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 231 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 102 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 113 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 101 bp overlap
ChIP K562 ENCFF634XYR 231 bp overlap
ChIP MCF-7 ENCFF694KOM 231 bp overlap
ChIP MCF-7 ENCFF724VCQ 105 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 231 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 231 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 220 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 231 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 205 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 202 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 229 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 231 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 211 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 231 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 177 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 217 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 230 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 225 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 193 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 220 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 231 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 231 bp overlap
SMC1A 2 datasets
ChIP MCF-7 GSE76893.SMC1A.MCF-7 171 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 141 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 213 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 158 bp overlap
STAG1 4 datasets
ChIP HeLa GSE126990.STAG1.HeLa 231 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 231 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 231 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 222 bp overlap
STAT3 2 datasets
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 231 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 231 bp overlap
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