chr4 : 89,957,521 89,957,921
400 bp 19 TFs 0 linked genes
This 400 bp open chromatin element has no linked target genes and is bound by 19 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:89,952,521 – 89,962,921
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 50 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 295 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 222 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 232 bp overlap
ARID2 1 dataset
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 400 bp overlap
ATF2 2 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 168 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 250 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 144 bp overlap
DPF2 2 datasets
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 390 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 128 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 212 bp overlap
HOXB13 3 datasets
ChIP LNCaP GSE96652.HOXB13.LNCaP 78 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 51 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 110 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 318 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 217 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 368 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 348 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 129 bp overlap
KMT2D 1 dataset
ChIP BIN-67_ctrl GSE117734.KMT2D.BIN-67_ctrl 201 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 233 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 54 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 343 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 228 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 249 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 69 bp overlap
ZNF264 1 dataset
ChIP HEK293 GSE76494.ZNF264.HEK293 167 bp overlap