chr4 : 46,386,671 – 46,386,859
188 bp 19 TFs 2 linked genes
This 188 bp open chromatin element is linked to GABRA2 and ENSG00000249330 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GABRA2 3.2 kb Proximal Proximity
ENSG00000249330 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:46,381,671 – 46,391,859
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 188 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 149 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 188 bp overlap
CTCF 261 datasets
ChIP 22Rv1 ENCFF466OXN 188 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 188 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 188 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 151 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 188 bp overlap
ChIP A549 ENCFF034FVO 188 bp overlap
ChIP A673 ENCFF123WOM 130 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 188 bp overlap
ChIP BE2C ENCFF757SRF 188 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 164 bp overlap
ChIP CHRF28811 ERP008568.CTCF.CHRF28811 188 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 188 bp overlap
ChIP Caco-2 ENCFF753NZV 172 bp overlap
ChIP Caco-2 ENCFF753NZV 188 bp overlap
ChIP Caco-2 ENCFF934QYS 187 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 162 bp overlap
ChIP D721Med ENCFF513FYD 143 bp overlap
ChIP DND-41 ENCFF913MRA 188 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 129 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 175 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 132 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 141 bp overlap
ChIP GM23338 ENCFF531QOI 188 bp overlap
ChIP GM23338 ENCFF772DML 116 bp overlap
ChIP H1 ENCFF230QSV 161 bp overlap
ChIP H1 ENCFF414GZI 89 bp overlap
ChIP H1 ENCFF764RHO 144 bp overlap
ChIP H9 ENCFF152GTF 188 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 188 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 188 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 161 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 188 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 173 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 185 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 188 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 186 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 173 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 182 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 58 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 144 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 188 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 188 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 188 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 181 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 168 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 181 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 183 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 168 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 188 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 179 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 176 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 173 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 167 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 144 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 102 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 148 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 140 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 122 bp overlap
ChIP HepG2 ENCFF194VBQ 188 bp overlap
ChIP HepG2 ENCFF668CTD 142 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 146 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 188 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 173 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 160 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 130 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 178 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 132 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 97 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 110 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 103 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 150 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 188 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 151 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 176 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 134 bp overlap
ChIP K-562_CRISPRi_N4293 GSE131349.CTCF.K-562_CRISPRi_N4293 148 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 188 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 153 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 186 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 177 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 188 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 188 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 188 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 188 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 188 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 112 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 140 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 172 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 172 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 99 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 114 bp overlap
ChIP MCF 10A ENCFF988BGF 188 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 188 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 134 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 188 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 172 bp overlap
ChIP MCF-7 ENCFF162GNE 180 bp overlap
ChIP MCF-7 ENCFF198DQX 188 bp overlap
ChIP MCF-7 ENCFF210JUZ 188 bp overlap
ChIP MCF-7 ENCFF494VXA 188 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 188 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 128 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 162 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 188 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 188 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 188 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 159 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 188 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 188 bp overlap
ChIP NPC GSE115407.CTCF.NPC 188 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 188 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 188 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 188 bp overlap
ChIP PC-3 ENCFF487TUI 188 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 188 bp overlap
ChIP Panc1 ENCFF056JQX 188 bp overlap
ChIP Peyer's patch ENCFF701KWW 188 bp overlap
ChIP Peyer's patch ENCFF746TCR 124 bp overlap
ChIP Peyer's patch ENCFF828IDE 188 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 177 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 188 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 163 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 172 bp overlap
ChIP RWPE-1 ENCSR303GFI.CTCF.RWPE-1 188 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 188 bp overlap
ChIP RWPE2 ENCFF911IEE 188 bp overlap
ChIP RWPE2 ENCFF911IEE 188 bp overlap
ChIP SEM GSE117864.CTCF.SEM 169 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 181 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 188 bp overlap
ChIP SK-N-SH ENCFF575DMG 188 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 172 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 99 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 188 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 188 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 126 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 174 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 177 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 179 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 171 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 188 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 161 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 157 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 188 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 188 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 112 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 188 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 170 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 142 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 188 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 164 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 188 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 186 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 188 bp overlap
ChIP U2OS_interphase GSE141081.CTCF.U2OS_interphase 172 bp overlap
ChIP VCaP ENCFF858YQT 188 bp overlap
ChIP VCaP ENCFF858YQT 188 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 188 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 188 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 154 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 141 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 188 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 188 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 176 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 188 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 188 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 129 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 127 bp overlap
ChIP brain ENCFF067KUH 188 bp overlap
ChIP brain ENCFF163BBN 143 bp overlap
ChIP brain ENCFF685VRG 188 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 188 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 188 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 156 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 188 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 188 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 188 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF149PUN 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF255MAF 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF257LSY 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277YTN 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 163 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF457ZGY 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 167 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF677SUG 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 173 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812JWS 161 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF883PFA 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 188 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 188 bp overlap
ChIP endodermal cell ENCFF471YCZ 188 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 117 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 188 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 153 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 141 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 180 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 188 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 148 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 185 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 188 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 161 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 177 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 188 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 188 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 188 bp overlap
ChIP hepatocyte ENCFF263BLJ 188 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 188 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 118 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 188 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 152 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 100 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 188 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 187 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 188 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 145 bp overlap
ChIP nephron ENCFF411ACD 188 bp overlap
ChIP nephron ENCFF589HXU 152 bp overlap
ChIP nephron ENCFF972IQB 188 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 188 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 71 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 188 bp overlap
ChIP neural cell ENCFF335ADI 188 bp overlap
ChIP neural crest cell ENCFF182LWK 188 bp overlap
ChIP neural progenitor cell ENCFF420RBO 156 bp overlap
ChIP neural progenitor cell ENCFF581WPG 188 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 188 bp overlap
ChIP neuron GSE115407.CTCF.neuron 188 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 180 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 94 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 188 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 185 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 188 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 188 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 163 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 188 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 188 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 151 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 188 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 179 bp overlap
ChIP smooth muscle cell ENCFF656FBT 188 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 167 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 188 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 148 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 163 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 100 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 163 bp overlap
NFIA 2 datasets
ChIP HepG2 ENCFF815HWK 188 bp overlap
ChIP K-562 GSE97661.NFIA.K-562 188 bp overlap
NFIB 2 datasets
ChIP MCF-7 ENCFF925CGH 188 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 188 bp overlap
NFIC 5 datasets
ChIP Hep-G2 GSE108514.NFIC.Hep-G2 188 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 149 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 188 bp overlap
ChIP K562 ENCFF167YID 188 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 182 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 174 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 188 bp overlap
RAD21 22 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 113 bp overlap
ChIP H1 ENCFF698EWO 168 bp overlap
ChIP H1 ENCFF967OJF 135 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 177 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 188 bp overlap
ChIP HepG2 ENCFF906QIS 172 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 158 bp overlap
ChIP Ishikawa ENCFF570JVV 157 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 134 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 122 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 188 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 188 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 176 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 150 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 156 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 188 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 188 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 139 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 176 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 188 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 188 bp overlap
ChIP neural cell ENCFF564MOT 188 bp overlap
RELA 7 datasets
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 188 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 178 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 188 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 157 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 145 bp overlap
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 144 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 159 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 124 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 102 bp overlap
SMC3 4 datasets
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 188 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 156 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 188 bp overlap
ChIP neural cell ENCFF795YGY 188 bp overlap
STAG1 3 datasets
ChIP HeLa GSE126990.STAG1.HeLa 188 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 188 bp overlap
ChIP HepG2 ENCFF843EBZ 188 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 188 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 124 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 126 bp overlap
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