chr4 : 34,514,899 34,515,675
776 bp 37 TFs 0 linked genes
This 776 bp open chromatin element has no linked target genes and is bound by 37 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:34,509,899 – 34,520,675
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 178 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 187 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 174 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 504 bp overlap
ChIP DE DE-FOXA2-2 604 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
GATA1 1 dataset
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 571 bp overlap
ChIP DE DE-GATA4-2 745 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 358 bp overlap
ChIP foregut GSE117136.GATA4.foregut 511 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 637 bp overlap
GATA6 8 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 113 bp overlap
ChIP DE DE-GATA6-1 559 bp overlap
ChIP DE DE-GATA6-2 699 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 568 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 264 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 500 bp overlap
ChIP foregut GSE117136.GATA6.foregut 548 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 462 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 438 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap
PAX4 1 dataset
Motif DE_60h DE_60h-PAX4_MA0068.2 8 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 265 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 558 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 776 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 539 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 312 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 526 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
ZBTB24 1 dataset
Motif DE_60h DE_60h-ZBTB24_MA2330.1 10 bp overlap
ZNF213 1 dataset
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
ZNF257 1 dataset
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
ZNF281 1 dataset
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
ZNF460 1 dataset
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ZNF85 1 dataset
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
Znf423 1 dataset
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap