Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

BATF3 1 dataset

ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 157 bp overlap

CTCF 52 datasets

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

ChIP GM23338 ENCFF531QOI 306 bp overlap

ChIP GM23338 ENCFF772DML 190 bp overlap

ChIP H1 ENCFF230QSV 165 bp overlap

ChIP H1 ENCFF764RHO 249 bp overlap

ChIP H9 ENCFF152GTF 192 bp overlap

ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 151 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 198 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 191 bp overlap

ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 203 bp overlap

ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 234 bp overlap

ChIP HCT-116 GSE131606.CTCF.HCT-116 194 bp overlap

ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 149 bp overlap

ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 156 bp overlap

ChIP HCT116 ENCFF003KHP 297 bp overlap

ChIP HCT116 ENCFF209YMI 231 bp overlap

ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 169 bp overlap

ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 130 bp overlap

ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 116 bp overlap

ChIP MCF-7 ENCFF139NQI 221 bp overlap

ChIP MCF-7 ENCFF198DQX 184 bp overlap

ChIP MCF-7 ENCFF414SZG 191 bp overlap

ChIP MCF-7 ENCFF494VXA 184 bp overlap

ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 269 bp overlap

ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 171 bp overlap

ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 169 bp overlap

ChIP MCF-7 GSE137216.CTCF.MCF-7 167 bp overlap

ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 120 bp overlap

ChIP MCF-7 GSE70764.CTCF.MCF-7 143 bp overlap

ChIP MCF-7 ERP000380.CTCF.MCF-7 104 bp overlap

ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 223 bp overlap

ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 228 bp overlap

ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 148 bp overlap

ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 183 bp overlap

ChIP PC-3 ENCSR359LOD.CTCF.PC-3 212 bp overlap

ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 179 bp overlap

ChIP T-47D GSE111923.CTCF.T-47D 241 bp overlap

ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 166 bp overlap

ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 190 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 120 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 223 bp overlap

ChIP endodermal cell ENCFF471YCZ 164 bp overlap

ChIP hESC_D0 GSE116862.CTCF.hESC_D0 167 bp overlap

ChIP hepatocyte ERP000395.CTCF.hepatocyte 123 bp overlap

ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 148 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 126 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 201 bp overlap

ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 182 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 164 bp overlap

ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 207 bp overlap

ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 180 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 148 bp overlap

Ddit3::Cebpa 1 dataset

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

ESR1 5 datasets

ChIP MCF-7 GSE119057.ESR1.MCF-7 164 bp overlap

ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 143 bp overlap

ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 165 bp overlap

ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 159 bp overlap

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 215 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

FOS 1 dataset

Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap

FOSL1::JUND 1 dataset

Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

Jun 1 dataset

Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap

LIN54 1 dataset

Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap

MYB 1 dataset

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 233 bp overlap

Nr2e1 1 dataset

Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap

PKNOX1 1 dataset

Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU3F3 1 dataset

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

PPARA::RXRA 1 dataset

Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

RAD21 8 datasets

ChIP H1 ENCFF698EWO 205 bp overlap

ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 139 bp overlap

ChIP HCT116 ENCFF568PEO 247 bp overlap

ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 152 bp overlap

ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 118 bp overlap

ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 172 bp overlap

ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 172 bp overlap

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 133 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap

SMC1A 1 dataset

ChIP HCT-116 GSE112000.SMC1A.HCT-116 60 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

STAG1 2 datasets

ChIP MCF-7 ERP000209.STAG1.MCF-7 134 bp overlap

ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 110 bp overlap

TEAD4 1 dataset

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

ZNF16 1 dataset

Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 192 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap

Genome Browser