chr4 : 16,092,825 16,093,195
370 bp 17 TFs 1 linked gene
This 370 bp open chromatin element is linked to PROM1 and is bound by 17 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PROM1 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:16,087,825 – 16,098,195
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 118 bp overlap
CTCF 40 datasets
ChIP BE2C ENCFF757SRF 230 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 145 bp overlap
ChIP GM23338 ENCFF772DML 51 bp overlap
ChIP H1 ENCFF230QSV 134 bp overlap
ChIP H1 ENCFF764RHO 220 bp overlap
ChIP H9 ENCFF152GTF 162 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 163 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 103 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 141 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 98 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 130 bp overlap
ChIP HepG2 ENCFF194VBQ 205 bp overlap
ChIP HepG2 ENCFF348BUL 173 bp overlap
ChIP HepG2 ENCFF668CTD 134 bp overlap
ChIP HepG2 ENCFF757EKU 148 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 139 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 165 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 103 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 163 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 157 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 208 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 135 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 112 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 146 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 129 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 161 bp overlap
ChIP endodermal cell ENCFF471YCZ 201 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 180 bp overlap
ChIP heart left ventricle ENCFF987PUT 255 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 190 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 210 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 162 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 136 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 157 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 163 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 156 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 155 bp overlap
ChIP neural progenitor cell ENCFF420RBO 308 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 270 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 149 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 162 bp overlap
EZH2 1 dataset
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 343 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap
RAD21 12 datasets
ChIP H1 ENCFF698EWO 195 bp overlap
ChIP H1 ENCFF967OJF 192 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 138 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 160 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 139 bp overlap
ChIP HepG2 ENCFF360ZSW 178 bp overlap
ChIP HepG2 ENCFF906QIS 94 bp overlap
ChIP HepG2 ENCFF963UBJ 202 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 128 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 179 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 125 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 125 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 66 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 113 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 359 bp overlap
SMC3 1 dataset
ChIP Hep-G2 ENCSR000EDW.SMC3.Hep-G2 126 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 370 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 170 bp overlap
ChIP HepG2 ENCFF843EBZ 131 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 137 bp overlap
ZNF331 1 dataset
ChIP HEK293 GSE76494.ZNF331.HEK293 157 bp overlap
ZNF563 2 datasets
ChIP HEK293 GSE76494.ZNF563.HEK293 99 bp overlap
ChIP HepG2 ENCFF736TZS 319 bp overlap
ZNF667 1 dataset
ChIP HEK293 GSE76494.ZNF667.HEK293 99 bp overlap