chr3 : 192,566,572 – 192,566,683
111 bp 14 TFs 1 linked gene
This 111 bp open chromatin element is linked to ENSG00000289165 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289165 279 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:192,561,572 – 192,571,683
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 73 bp overlap
BRD4 1 dataset
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 71 bp overlap
CEBPB 1 dataset
ChIP HCT116 ENCFF097OLY 97 bp overlap
CTCF 193 datasets
ChIP 22Rv1 ENCFF466OXN 61 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 111 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 111 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 111 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 71 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 111 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 111 bp overlap
ChIP C4-2B ENCFF821XVN 111 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 111 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 111 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 111 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 70 bp overlap
ChIP CUTLL1_GSI GSE130140.CTCF.CUTLL1_GSI 111 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 111 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 111 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 85 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 111 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 111 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 111 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 111 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 111 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 111 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 111 bp overlap
ChIP GM23338 ENCFF832KWE 91 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 111 bp overlap
ChIP H9 ENCFF152GTF 60 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 68 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 77 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 59 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 72 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 111 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 111 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 80 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 111 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 111 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 106 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 94 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 72 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 95 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 81 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 77 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 111 bp overlap
ChIP HFFc6 ENCFF005CJI 111 bp overlap
ChIP HL-60 ERP008568.CTCF.HL-60 63 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 111 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 64 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 64 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 98 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 110 bp overlap
ChIP ID00015 GSE76922.CTCF.ID00015 111 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 111 bp overlap
ChIP K-562 GSE92879.CTCF.K-562 111 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 111 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 60 bp overlap
ChIP KMS-11_NSD2-Low GSE131651.CTCF.KMS-11_NSD2-Low 82 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 111 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 111 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 111 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 73 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 94 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 111 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 85 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 50 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 103 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 68 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 111 bp overlap
ChIP NPC GSE115407.CTCF.NPC 111 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 77 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 111 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 111 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 111 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 111 bp overlap
ChIP PC-9 ENCFF539ULB 69 bp overlap
ChIP Panc1 ENCFF056JQX 111 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 111 bp overlap
ChIP RWPE2 ENCFF911IEE 111 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 70 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 111 bp overlap
ChIP SK-N-SH ENCFF575DMG 54 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 111 bp overlap
ChIP SLK_CTCF-KD GSE138105.CTCF.SLK_CTCF-KD 111 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 111 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 111 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 79 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 111 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 111 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 111 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 111 bp overlap
ChIP T-47D_NaCl-30min GSE111923.CTCF.T-47D_NaCl-30min 111 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 111 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 111 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 75 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 80 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 111 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 111 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 87 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 111 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 99 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 77 bp overlap
ChIP VCaP ENCFF858YQT 111 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 111 bp overlap
ChIP activated B cell ENCFF418DVI 111 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 111 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 111 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 91 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 76 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 111 bp overlap
ChIP astrocyte ENCFF558APA 111 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 111 bp overlap
ChIP brain ENCFF067KUH 52 bp overlap
ChIP brain ENCFF163BBN 111 bp overlap
ChIP brain ENCFF685VRG 99 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 111 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 111 bp overlap
ChIP chondrocyte ENCFF134ORZ 111 bp overlap
ChIP colon_transverse ENCSR608WPS.CTCF.colon_transverse 53 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 53 bp overlap
ChIP colonic mucosa ENCFF319RUN 64 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 52 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 111 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 111 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 50 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 76 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 76 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 67 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 54 bp overlap
ChIP endodermal cell ENCFF471YCZ 59 bp overlap
ChIP endothelial cell ENCFF663LIE 111 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 111 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 60 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 111 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 67 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR353DFU.CTCF.esophagus_muscularis-mucosa 55 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 60 bp overlap
ChIP fibroblast_LUNG ENCSR000DWY.CTCF.fibroblast_LUNG 62 bp overlap
ChIP gastrocnemius-medialis ENCSR071XWO.CTCF.gastrocnemius-medialis 70 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 70 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 89 bp overlap
ChIP gastroesophageal-sphincter ENCSR206ETG.CTCF.gastroesophageal-sphincter 52 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 111 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 111 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 111 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 111 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 111 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 80 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 111 bp overlap
ChIP heart right ventricle ENCFF027ORH 54 bp overlap
ChIP heart right ventricle ENCFF979TCT 74 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 106 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 90 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 61 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 111 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 111 bp overlap
ChIP left lung ENCFF620MAT 74 bp overlap
ChIP left lung ENCFF696EWL 50 bp overlap
ChIP leukemia_DMSO-24h GSE142161.CTCF.leukemia_DMSO-24h 63 bp overlap
ChIP lung ENCSR463XCZ.CTCF.lung 66 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 111 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 106 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 72 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 98 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 104 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 75 bp overlap
ChIP neural cell ENCFF335ADI 69 bp overlap
ChIP neural crest cell ENCFF182LWK 68 bp overlap
ChIP neural progenitor cell ENCFF581WPG 109 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 111 bp overlap
ChIP neuron GSE115407.CTCF.neuron 60 bp overlap
ChIP pancreas_body ENCSR572DUJ.CTCF.pancreas_body 85 bp overlap
ChIP pancreas_body ENCSR307PFP.CTCF.pancreas_body 60 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 111 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 111 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 111 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 111 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 104 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 61 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 111 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 53 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 81 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 111 bp overlap
ChIP spleen ENCFF825QXK 79 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 111 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 111 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 111 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 111 bp overlap
ChIP stomach ENCSR185CCV.CTCF.stomach 103 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 72 bp overlap
ChIP tibial-artery ENCSR079YAP.CTCF.tibial-artery 56 bp overlap
ChIP tibial-nerve ENCSR875NEW.CTCF.tibial-nerve 108 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 63 bp overlap
ChIP upper lobe of left lung ENCFF170ORD 60 bp overlap
ChIP vagina ENCFF026NYX 50 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 77 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 111 bp overlap
POLR2A 1 dataset
ChIP IMR-90 ENCFF672YWV 111 bp overlap
RAD21 22 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 111 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 68 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 111 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 77 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 111 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 57 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 111 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 111 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 111 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 111 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 95 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 74 bp overlap
ChIP MDM GSE103477.RAD21.MDM 61 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 111 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 111 bp overlap
ChIP SLK_RAD21-KD GSE138105.RAD21.SLK_RAD21-KD 95 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 95 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 62 bp overlap
ChIP lymphoblast GSE155324.RAD21.lymphoblast 94 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 111 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 109 bp overlap
ChIP neural cell ENCFF564MOT 87 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 111 bp overlap
SMC1A 1 dataset
ChIP HCT-116 GSE112000.SMC1A.HCT-116 65 bp overlap
SMC3 3 datasets
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 111 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 111 bp overlap
ChIP neural cell ENCFF795YGY 69 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 111 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 111 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 74 bp overlap
ZNF449 1 dataset
ChIP HEK293 GSE76494.ZNF449.HEK293 102 bp overlap
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