chr3 : 128,160,456 128,161,161
705 bp 21 TFs 3 linked genes
This 705 bp open chromatin element is linked to EEFSEC, RUVBL1, and SEC61A1 and is bound by 21 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
EEFSEC 7.0 kb Proximal Proximity
RUVBL1 37.0 kb Distal Multiome
SEC61A1 108.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:128,155,456 – 128,166,161
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 177 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 117 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 209 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 455 bp overlap
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 90 bp overlap
BRD4 2 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 501 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 321 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 321 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 180 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 705 bp overlap
ChIP DE DE-FOXA2-2 647 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 151 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 289 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 234 bp overlap
ChIP erythroblast ENCFF867JAR 605 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 476 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 221 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 705 bp overlap
ChIP DE DE-GATA4-2 705 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 321 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 705 bp overlap
ChIP DE DE-GATA6-2 705 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 603 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 530 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 193 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 161 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 127 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 705 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 578 bp overlap
TAL1 3 datasets
ChIP CD34 GSE52924.TAL1.CD34 183 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 161 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 238 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 130 bp overlap